Package: BinaryDosage 1.0.0

BinaryDosage: Creates, Merges, and Reads Binary Dosage Files

Tools to create binary dosage from either VCF or GEN files, merge binary dosage files, and read binary dosage files.

Authors:John Morrison [aut, cre], NIEHS [fnd], NIEHS [fnd], NIEHS [fnd], NIEHS [fnd]

BinaryDosage_1.0.0.tar.gz
BinaryDosage_1.0.0.zip(r-4.5)BinaryDosage_1.0.0.zip(r-4.4)BinaryDosage_1.0.0.zip(r-4.3)
BinaryDosage_1.0.0.tgz(r-4.4-x86_64)BinaryDosage_1.0.0.tgz(r-4.4-arm64)BinaryDosage_1.0.0.tgz(r-4.3-x86_64)BinaryDosage_1.0.0.tgz(r-4.3-arm64)
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BinaryDosage.pdf |BinaryDosage.html✨
BinaryDosage/json (API)
NEWS

# Install 'BinaryDosage' in R:
install.packages('BinaryDosage', repos = c('https://jimb3.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

4.06 score 33 scripts 200 downloads 13 exports 21 dependencies

Last updated 5 years agofrom:ad6bc52035. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 07 2024
R-4.5-win-x86_64NOTENov 07 2024
R-4.5-linux-x86_64NOTENov 07 2024
R-4.4-win-x86_64NOTENov 07 2024
R-4.4-mac-x86_64NOTENov 07 2024
R-4.4-mac-aarch64NOTENov 07 2024
R-4.3-win-x86_64NOTENov 07 2024
R-4.3-mac-x86_64NOTENov 07 2024
R-4.3-mac-aarch64NOTENov 07 2024

Exports:bdapplybdmergegenapplygentobdgetaafgetbdinfogetgeninfogetmafgetrsqgetsnpgetvcfinfovcfapplyvcftobd

Dependencies:clicodetoolsdata.tablediagramdigestfuturefuture.applyglobalsKernSmoothlatticelavalistenvMatrixnumDerivparallellyprodlimprogressrRcppshapeSQUAREMsurvival

Binary Dosage Formats

Rendered frombdformats.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Estimating Imputed R-squares

Rendered fromr2estimates.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Genetic File Information

Rendered fromgeneticfileinfo.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Merging Files

Rendered frommergingfiles.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Using Binary Dosage files

Rendered fromusingbdfiles.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Using GEN Files

Rendered fromusinggenfiles.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13

Using VCF files

Rendered fromusingvcffiles.Rmdusingknitr::rmarkdownon Nov 07 2024.

Last update: 2020-01-13
Started: 2020-01-13