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  "Description": "Tools to run genome-wide association study (GWAS) and\ngenome-wide by environment interaction study (GWEIS) scans\nusing the genetic data stored in a binary dosage file. The user\nprovides a data frame with the subject's covariate data and the\ninformation about the binary dosage file returned by the\nBinaryDosage::getbdinfo() routine.",
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      "title": "Routine to allocate memory needed to perform a GWEIS.",
      "topics": [
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  "_vignettes": [
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      "source": "UsingGxEScanR.Rmd",
      "filename": "UsingGxEScanR.html",
      "title": "Using GxEScanR",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Notation and Models",
        "Model 0 - Environment-only Model",
        "Model 1 - Gene-only Model",
        "Model 2 - GxE Interaction Model",
        "Model 3 - EG Model",
        "Model 4 - Case-only Model",
        "Model 5 - Control-only Model",
        "Steps to Run a GWEIS",
        "Step 1: Preparing the Data",
        "Genetic Data",
        "Subject Data",
        "Step 2: Fitting the Base Model",
        "Continuous Phenotype",
        "Dichotomous Phenotype",
        "Step 3: Allocating Memory for the GWEIS",
        "Step 4: Running the GWEIS",
        "Step 5: Processing the Results",
        "SNP Information and Allele Frequency",
        "Model 1 Output: bg_ge",
        "Model 2 Output: bg_gxe, bgxe, joint",
        "Models 3–5 Output: bg_eg, bg_case, bg_ctrl"
      ],
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      "modified": "2026-05-01 19:45:27",
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